Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTTCTTGTAATATCTACTAATTTTATATTAGATGCCAGGC
.((((((((..((((((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198908
GeneSymbolCCDC169
Binding site5260,5304
Score0.846
Seed1
Au0.721
Energy-20.5
Binding len20
Me-7.861
Phylopstem0.115734125
Phylopflank0.07451460000000001
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure