Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCTGTGTGCACAGGTG
((((((((((((..(((((...&)))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001198908
GeneSymbolCCDC169
Binding site4180,4199
Score0.923
Seed1
Au0.603
Energy-19.7
Binding len19
Me-6.084
Phylopstem-0.12755961538461535
Phylopflank0.009160912500000016
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure