Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAACAGCAGTTGCT
..((((((((.(((...((((&))))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198908
GeneSymbolCCDC169
Binding site141,160
Score0.846
Seed1
Au0.426
Energy-21.5
Binding len19
Me-8.75
Phylopstem0.31176599999999993
Phylopflank0.2669955787499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure