Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTAGGGTGAGCTCTGCCCGGCTGCAGG
(((((((((.(((........&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198909
GeneSymbolATP6V1F
Binding site18,48
Score0.923
Seed1
Au0.338
Energy-18.7
Binding len14
Me-7.005
Phylopstem-0.5231312222222223
Phylopflank1.9964407616666666
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure