Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAACAGCAGTTGCT
..((((((((.(((...((((&))))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198910
GeneSymbolCCDC169-SOHLH2
Binding site141,160
Score0.846
Seed1
Au0.456
Energy-21.5
Binding len19
Me-8.75
Phylopstem0.465649625
Phylopflank0.11764871375000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure