Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCTGTGAGCAGCTGCGT
.(((((((((....((((...&)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198910
GeneSymbolCCDC169-SOHLH2
Binding site1161,1180
Score1.0
Seed1
Au0.574
Energy-19.3
Binding len19
Me-12.111
Phylopstem0.6257060777777778
Phylopflank0.50846074625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure