Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGGCTGGTGGCTGCAT
.((((((((((((((..(((.&)))..)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198954
GeneSymbolRNF103-CHMP3
Binding site1589,1610
Score0.923
Seed1
Au0.456
Energy-20.0
Binding len21
Me-4.026
Phylopstem-0.08060833999999999
Phylopflank-0.08089681874999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure