Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGATCGCGGCATTGCAC
.(((((((((((((....(((&)))..)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198963
GeneSymbolFKTN
Binding site1883,1904
Score0.923
Seed1
Au0.441
Energy-19.7
Binding len21
Me-4.762
Phylopstem-0.2272452
Phylopflank-0.15099827499999996
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure