Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCGGAAGAGTGCAAAGGAATTACTGCAACTAGCAGCG
.....((((((((((((((((&))))........................))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198963
GeneSymbolFKTN
Binding site1028,1070
Score0.846
Seed0
Au0.618
Energy-17.3
Binding len42
Me-13.666
Phylopstem3.0937740073170734
Phylopflank4.081476928749999
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure