Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGACTGTGTATGGGGTCCAGCCAGCTCAGCAGCTGCAAT
(((((((((((((((...((.&.))...)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198979
GeneSymbolSMAP2
Binding site1163,1207
Score0.846
Seed1
Au0.456
Energy-23.6
Binding len24
Me-4.171
Phylopstem2.4018268823529407
Phylopflank4.043829204999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure