Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCTCTGCGCTGCGC
.((((((.((((..(((.((.&)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001198999
GeneSymbolSEMA6D
Binding site232,250
Score0.846
Seed1
Au0.294
Energy-18.8
Binding len18
Me-8.253
Phylopstem1.3424095000000003
Phylopflank0.8982523399999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure