Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCCCCGGCTGCAC
.((((((((.((((.(.....&).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355479
GeneSymbolGGTLC3
Binding site600,616
Score0.923
Seed1
Au0.397
Energy-19.5
Binding len16
Me-5.771
Phylopstem1.839574175
Phylopflank1.62976317875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure