Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAAATAACTGCAGTGGCAAA
((((.(((((((((((...((&))...))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199022
GeneSymbolCCP110
Binding site2560,2582
Score0.962
Seed0
Au0.676
Energy-20.3
Binding len22
Me-8.057
Phylopstem2.5072445454545456
Phylopflank2.973792798750001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure