Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGCTGCGATGCCAAAGCTGCAT
.((((((((((((....((((&))))..)))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199022
GeneSymbolCCP110
Binding site1650,1677
Score0.846
Seed1
Au0.529
Energy-19.7
Binding len27
Me-5.619
Phylopstem0.334091
Phylopflank0.6453412962499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure