Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGTAGGACAGGAGCAGGCTCCAAGGGGCTGCAGA
(((((((((((((((.(((.(&).))))))))))......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199040
GeneSymbolSTRA6
Binding site1049,1092
Score0.923
Seed1
Au0.426
Energy-21.1
Binding len43
Me-4.171
Phylopstem3.2605649578378375
Phylopflank2.277340239
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure