Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGACAGCCTCAGACCAGGGGAGGAAGACGAAGGGATGCAGCTGCT
..((((((((((((...((((&.))))..)))).....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199041
GeneSymbolSTRA6
Binding site2178,2226
Score0.923
Seed1
Au0.412
Energy-21.6
Binding len41
Me-5.925
Phylopstem0.9387247060606061
Phylopflank2.2810482475000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure