Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAGCCGTAGGACAGGAGCAGGCTCCAAGGGGCTGCAGA
(((((((((((((((.(((.(&).))))))))))......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199041
GeneSymbolSTRA6
Binding site1060,1103
Score1.0
Seed1
Au0.426
Energy-21.1
Binding len43
Me-4.171
Phylopstem2.9531366410810804
Phylopflank1.9936373665
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end6
PositionCDS
2D Structure