Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCCTCCCTTGCAGGGAGCCTTCCCTTGCACTGTGCTGCT
..(((((.((((.(((((((.&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199052
GeneSymbolLEMD1
Binding site469,516
Score0.923
Seed0
Au0.368
Energy-23.0
Binding len18
Me-8.56
Phylopstem-0.26705416285714284
Phylopflank0.2556693060000003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure