Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATCAATGACTTCAAGGATGTGACGCACACATGCCCCAGCTGCAAA
(((((((((.((((((.....&.))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199054
GeneSymbolCDIP1
Binding site753,803
Score0.923
Seed1
Au0.456
Energy-21.1
Binding len19
Me-5.18
Phylopstem1.0344555555555557
Phylopflank0.95096510625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure