Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCATCCCAGCTGCT
..(((((((.((.((((....&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199058
GeneSymbolARPIN-AP3S2
Binding site6151,6166
Score0.846
Seed1
Au0.397
Energy-20.2
Binding len15
Me-7.489
Phylopstem-0.33923198571428564
Phylopflank-0.5505206212500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure