Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCCACTGCTGCC
..(((((.(.(((((((....&))))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199085
GeneSymbolTDRD5
Binding site3322,3338
Score0.923
Seed0
Au0.456
Energy-20.0
Binding len16
Me-8.513
Phylopstem2.268215142857143
Phylopflank1.62981924375
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure