Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGGCCGTGCTGCAC
.((((((..(((((((((((.&))))))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199099
GeneSymbolBAIAP3
Binding site1277,1300
Score0.846
Seed1
Au0.368
Energy-26.0
Binding len23
Me-7.163
Phylopstem1.9286400000000001
Phylopflank1.1429794162499995
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure