Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACAGCTGCGGCTTTGGAGAACTTACAGGTGGAGGCGAG
(((((((((((((((((((((&)))).))))))))))))).....................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199119
GeneSymbolTRIM39-RPP21
Binding site46,90
Score1.0
Seed1
Au0.441
Energy-25.2
Binding len44
Me-3.938
Phylopstem1.809294372093023
Phylopflank2.0421818754444443
Longest consecutive pairings13
Position of longest consecutive pairings26
Pairings in 3prime end8
PositionCDS
2D Structure