Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGCAGCAGTGTATCAACACGGCTGCC
..(((((((.((((((.((((&)))).)))))..........).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199138
GeneSymbolNLRC4
Binding site1789,1819
Score0.846
Seed1
Au0.456
Energy-19.6
Binding len30
Me-6.2
Phylopstem2.5100617142857145
Phylopflank1.2543853544999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure