Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCTTCGTGGCTGCAT
.(((((((((((((((.....&)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199140
GeneSymbolAMMECR1L
Binding site738,756
Score0.846
Seed1
Au0.441
Energy-20.3
Binding len18
Me-3.793
Phylopstem0.5271450294117647
Phylopflank0.5326198737500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure