Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTCTGCAGCTGG
...(((((((((..((.((((&)))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199142
GeneSymbolEIF3C
Binding site2861,2879
Score0.846
Seed0
Au0.338
Energy-22.3
Binding len18
Me-8.661
Phylopstem3.474741111111111
Phylopflank4.47007194875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure