Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCCGCAGCTTCTCTGCT
..(((((((((((.((.....&)).))))))))).....)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199143
GeneSymbolXIRP2
Binding site895,915
Score0.846
Seed1
Au0.485
Energy-18.6
Binding len20
Me-5.814
Phylopstem2.3298780625
Phylopflank2.7107397237499997
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure