Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACCGCAGATGCTTCTGCAAC
(((((((((((((((((....&)))))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199144
GeneSymbolXIRP2
Binding site10085,10109
Score0.846
Seed1
Au0.515
Energy-24.4
Binding len24
Me-3.938
Phylopstem0.9159882739130435
Phylopflank2.4967903487500003
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure