Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAACCAATGTGGCAGCTTTTGCCTGTAGAGCAAG
(((((((((((((((.(((((&))))))))))......))))))............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199144
GeneSymbolXIRP2
Binding site6211,6250
Score0.923
Seed1
Au0.574
Energy-20.8
Binding len39
Me-4.171
Phylopstem0.8187482060606062
Phylopflank1.2136857749999996
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure