Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGACAGAGCAGCTGCT
..((((((((..((((..(((&))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199145
GeneSymbolXIRP2
Binding site1947,1965
Score0.846
Seed1
Au0.441
Energy-19.9
Binding len18
Me-11.129
Phylopstem0.8328615
Phylopflank0.7371241275
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure