Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAGCTGAGGCTGCT
..((((((.((((((((.(((&))).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199160
GeneSymbolUSP19
Binding site4207,4227
Score0.904
Seed1
Au0.338
Energy-25.5
Binding len20
Me-6.013
Phylopstem0.13918357499999998
Phylopflank1.4010682075000005
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure