Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGGCAGCTGCT
..((((((((..((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199160
GeneSymbolUSP19
Binding site4468,4485
Score0.846
Seed1
Au0.324
Energy-22.2
Binding len17
Me-11.129
Phylopstem4.7347325
Phylopflank3.286528415
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure