Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGTGCCAGA
..(((((((....((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330650
GeneSymbolTARM1
Binding site722,736
Score0.846
Seed1
Au0.456
Energy-17.4
Binding len14
Me-13.66
Phylopstem-3.743891428571429
Phylopflank-0.9119459725
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure