Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATGCCACCAAGCAGAGCCTCTCTGGTGCCCAGAGGGCTCTGATGAGAAGAGCTGGTT
.(((((((((((((((((((..&.)))))))))))............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001355613
GeneSymbolCPHXL
Binding site404,463
Score0.923
Seed1
Au0.441
Energy-25.1
Binding len33
Me-3.793
Phylopstem-0.2748384032258065
Phylopflank-0.26325876375
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure