Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTTCTAAGGTGACAGCTCCTCAGCCAGCTGCAAC
(((((((((((((((((((((&)))))...........)))))).....)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199185
GeneSymbolATP2C1
Binding site798,837
Score0.846
Seed1
Au0.515
Energy-21.0
Binding len39
Me-3.938
Phylopstem3.1353156526315784
Phylopflank4.9278222225
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure