Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGCTCAGTCACAGCTGCAGA
(((((((((.(((((..(((.&))).....))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355613
GeneSymbolCPHXL
Binding site1090,1114
Score0.923
Seed1
Au0.456
Energy-19.4
Binding len24
Me-5.413
Phylopstem-0.38060921111111123
Phylopflank0.17126750874999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure