Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGGCTGCAGCTCAC
.((.((((((((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001355613
GeneSymbolCPHXL
Binding site384,402
Score0.846
Seed0
Au0.456
Energy-18.5
Binding len18
Me-7.794
Phylopstem-0.36828842
Phylopflank-0.24078932625000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure