Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCCGTGGCTGGAGA
((.((((((((((((......&)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199254
GeneSymbolSGO1
Binding site70,86
Score0.923
Seed0
Au0.353
Energy-20.0
Binding len16
Me-5.728
Phylopstem0.18625184583333332
Phylopflank0.22792043624999997
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure