Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAATCCAGGCTGTT
..((((((..(((((((((..&)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199280
GeneSymbolHAS3
Binding site3272,3290
Score0.897
Seed1
Au0.529
Energy-20.3
Binding len18
Me-7.256
Phylopstem0.88877174
Phylopflank-0.010565999500000006
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure