Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCAGCCGGGTTAGCAT
.(((((((.(((((((((((.&))))).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199280
GeneSymbolHAS3
Binding site2935,2956
Score0.846
Seed1
Au0.471
Energy-20.4
Binding len21
Me-4.85
Phylopstem-0.0071933083333333425
Phylopflank0.21752385962499998
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure