Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTAATGGATGTCCTACAGCTGCTTGTTGCAT
.((((((.((((((((.(((.&.)))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199282
GeneSymbolLRBA
Binding site2359,2392
Score0.872
Seed1
Au0.618
Energy-23.3
Binding len21
Me-6.107
Phylopstem6.48000625
Phylopflank5.9729579269999995
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure