Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATAACTGCACTGCAT
.(((((.((((((((((((((&))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199295
GeneSymbolZNF549
Binding site1966,1986
Score0.846
Seed0
Au0.603
Energy-28.4
Binding len20
Me-5.337
Phylopstem-0.9287011
Phylopflank-1.507524525
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure