Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACCAGGGATGGAAGAGGCAGGCTGCAGCAGAGAGATGCAGA
(((((((((((((((((((((&))))).................)))).))))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199298
GeneSymbolUIMC1
Binding site2090,2137
Score0.808
Seed1
Au0.5
Energy-19.5
Binding len47
Me-3.938
Phylopstem3.5193211456521736
Phylopflank2.7333143625
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure