Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCCTAATTTTACAGGCAAGGACACAGCAGCTGCGAG
(((((((((((.(((((((((&.))))))))).).........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001356338
GeneSymbolB3GALT5
Binding site1683,1723
Score0.846
Seed1
Au0.5
Energy-23.5
Binding len32
Me-7.284
Phylopstem0.10049609500000001
Phylopflank-0.5213526625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure