Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACCCAGAAACAGCAGGAGAGAGAAGAAACAGGCCAGCTGTGAG
(((((((((.(.((((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199317
GeneSymbolCMTM2
Binding site75,122
Score0.808
Seed1
Au0.471
Energy-17.8
Binding len17
Me-8.527
Phylopstem0.1599659
Phylopflank0.19776930099999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure