Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCGGCTGCGGCAGCAGA
((((.(((((((((((..(((&))).))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199327
GeneSymbolFPGT-TNNI3K
Binding site2346,2367
Score0.949
Seed0
Au0.412
Energy-24.4
Binding len21
Me-8.057
Phylopstem3.7691679090909087
Phylopflank4.3860087087499995
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure