Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAACCAACAGCTGTCAGA
(((((((((.(((((((((..&)))))))))..)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199327
GeneSymbolFPGT-TNNI3K
Binding site191,213
Score0.923
Seed1
Au0.588
Energy-24.3
Binding len22
Me-5.18
Phylopstem3.565187911111111
Phylopflank3.3699095050000007
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure