Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCATTTAGCAGTTTACAAGGATAATGCAGA
((((((((((...((((((((&))))))))....)))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199327
GeneSymbolFPGT-TNNI3K
Binding site649,684
Score1.0
Seed1
Au0.588
Energy-20.5
Binding len35
Me-11.398
Phylopstem3.0677091409090895
Phylopflank3.639088277249999
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure