Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGGAACTTGCTTACAACCAACAGCTGTCAGA
(((((((((.(((((((((..&.)))))))))..)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199328
GeneSymbolFPGT
Binding site180,213
Score1.0
Seed1
Au0.588
Energy-24.4
Binding len23
Me-5.18
Phylopstem2.8516938888888888
Phylopflank3.242918145
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure