Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAACCTTGCTAAATCTGCAT
.(((((..(((((((((((((&)))))))))))..)).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001199380
GeneSymbolRNF145
Binding site818,844
Score1.0
Seed0
Au0.618
Energy-21.3
Binding len26
Me-7.651
Phylopstem0.23660362666666662
Phylopflank0.3826476864999999
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure